SMTL ID : 4g0m.2 (1 other biounit)

Crystal structure of Arabidopsis thaliana AGO2 MID domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: Y.101, K.105, T.116, Q.117, C.118 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.117, A:Q.117, A:C.118 Salt bridges: A:K.105, A:K.142 SO4.2: 4 residues within 4Å: Chain A: N.35, R.39, R.42, R.132 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.42 Water bridges: A:N.35, A:N.35, A:R.39, A:R.42 Salt bridges: A:R.39, A:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Frank, F. et al., Arabidopsis Argonaute MID domains use their nucleotide specificity loop to sort small RNAs. Embo J. (2012)

Release Date

2012-07-25

Peptides

Protein argonaute 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Protein argonaute 2

Related Entries With Identical Sequence