SMTL ID : 4g2k.1

Crystal structure of the Marburg Virus GP2 ectodomain in its post-fusion conformation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-trimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: F.85, L.86, T.88, R.89 Chain C: W.90 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.86, A:T.88, A:R.89, A:R.89 GOL.3: 5 residues within 4Å: Chain C: R.80, D.84, T.93, C.94, C.101 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:R.80, C:D.84, C:C.101

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: S.76, N.79 Chain B: S.76, N.79 Chain C: S.76, N.79 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koellhoffer, J.F. et al., Crystal Structure of the Marburg Virus GP2 Core Domain in Its Postfusion Conformation. Biochemistry (2012)

Release Date

2012-09-12

Peptides

General control protein GCN4, Envelope glycoprotein GP2 chimera: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

General control protein GCN4, Envelope glycoprotein GP2 chimera