SMTL ID : 4gag.1

Structure of the broadly neutralizing antibody AP33 in complex with its HCV epitope (E2 residues 412-423)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: P.123, P.124, T.209, V.211 No protein-ligand interaction detected (PLIP) GOL.2: 6 residues within 4Å: Chain A: V.168, H.169 Chain B: T.168, D.169, Q.170, D.171 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Water bridges: B:T.168, B:S.172, A:V.168, A:T.170 Hydrogen bonds: A:H.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Potter, J.A. et al., Toward a Hepatitis C Virus Vaccine: the Structural Basis of Hepatitis C Virus Neutralization by AP33, a Broadly Neutralizing Antibody. J.Virol. (2012)

Release Date

2012-10-10

Peptides

NEUTRALIZING ANTIBODY AP33 HEAVY CHAIN: A
NEUTRALIZING ANTIBODY AP33 LIGHT CHAIN: B
Genome polyprotein: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
P

NEUTRALIZING ANTIBODY AP33 HEAVY CHAIN

NEUTRALIZING ANTIBODY AP33 LIGHT CHAIN

Genome polyprotein

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