- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.42 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PRF: 7-DEAZA-7-AMINOMETHYL-GUANINE(Non-covalent)
- 2 x ZN: ZINC ION(Non-covalent)
ZN.2: 4 residues within 4Å:- Chain A: C.318, C.320, C.323, H.349
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:C.318, A:C.320, A:C.323, A:H.349
ZN.8: 4 residues within 4Å:- Chain B: C.318, C.320, C.323, H.349
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:C.318, B:C.320, B:C.323, B:H.349
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 3 residues within 4Å:- Chain A: P.252, D.254, K.255
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.254, A:K.255
GOL.4: 6 residues within 4Å:- Chain A: P.56, E.57, G.94, W.95, D.96, R.97
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:P.56, A:G.94, A:D.96, A:R.97
- Water bridges: A:E.57, A:R.97
GOL.5: 7 residues within 4Å:- Chain A: W.296, E.317, K.360, F.373, D.376, F.377, R.380
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.317, A:D.376, A:R.380
- Water bridges: A:E.317
GOL.6: 2 residues within 4Å:- Chain A: E.119, E.120
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.120
GOL.9: 3 residues within 4Å:- Chain B: P.252, D.254, K.255
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:D.254, B:K.255
GOL.10: 6 residues within 4Å:- Chain B: P.56, E.57, G.94, W.95, D.96, R.97
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:P.56, B:G.94, B:D.96, B:R.97
- Water bridges: B:E.57, B:R.97
GOL.11: 7 residues within 4Å:- Chain B: W.296, E.317, K.360, F.373, D.376, F.377, R.380
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:E.317, B:D.376, B:R.380
- Water bridges: B:K.360
GOL.12: 2 residues within 4Å:- Chain B: E.119, E.120
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Biela, I. et al., Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor. Plos One (2013)
- Release Date
- 2012-08-29
- Peptides
- Queuine tRNA-ribosyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.42 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PRF: 7-DEAZA-7-AMINOMETHYL-GUANINE(Non-covalent)
- 2 x ZN: ZINC ION(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Biela, I. et al., Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor. Plos One (2013)
- Release Date
- 2012-08-29
- Peptides
- Queuine tRNA-ribosyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A