SMTL ID : 4gd6.1

SHV-1 beta-lactamase in complex with penam sulfone SA1-204

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

monomer

Ligands

1 x 17K: (3R)-N-(2-formylindolizin-3-yl)-4-[(phenylacetyl)oxy]-3-sulfino-D-valine

17K.1: 13 residues within 4Å: Chain A: S.66, Y.101, S.126, V.212, A.213, L.216, K.230, T.231, G.232, A.233, R.239, N.270 Ligands: MA4.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.213, A:L.216, A:A.233 Hydrogen bonds: A:S.126, A:S.126, A:K.230 Water bridges: A:R.239 Salt bridges: A:R.239, A:R.239

2 x MA4: CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE(Non-covalent)

MA4.2: 14 residues within 4Å: Chain A: I.217, V.220, P.222, I.227, I.241, A.243, V.255, I.257, I.273, A.274, A.278, I.281, E.282 Ligands: MA4.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.217, A:I.227, A:I.241, A:A.243, A:V.255, A:I.257, A:I.273 Hydrogen bonds: A:S.22, A:E.282 MA4.3: 8 residues within 4Å: Chain A: A.213, L.216, T.231, R.239, N.270, I.273 Ligands: 17K.1, MA4.2 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.213, A:L.216, A:T.231, A:I.273

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ke, W. et al., Structures of SHV-1 beta-lactamase with penem and penam sulfone inhibitors that form cyclic intermediates stabilized by carbonyl conjugation. Plos One (2012)

Release Date

2013-07-31

Peptides

Beta-lactamase SHV-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase SHV-1

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