- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.1: 40 residues within 4Å:- Chain A: I.14, G.15, G.17, I.18, A.19, L.38, E.39, A.40, R.41, G.45, G.46, R.47, L.48, I.61, G.62, A.63, S.64, W.65, H.67, Y.201, C.221, E.222, V.223, T.252, V.253, P.254, V.257, G.270, L.294, W.440, Y.445, A.449, Y.450, G.478, E.479, G.487, C.488, A.489, A.492
- Ligands: PG4.2
30 PLIP interactions:30 interactions with chain A- Hydrophobic interactions: A:L.294, A:A.449, A:Y.450
- Hydrogen bonds: A:G.17, A:A.19, A:A.40, A:R.41, A:R.47, A:R.47, A:A.63, A:S.64, A:W.65, A:W.65, A:Y.201, A:V.223, A:V.223, A:E.479, A:G.487, A:A.489
- Water bridges: A:I.18, A:G.20, A:G.46, A:R.47, A:R.47, A:L.48, A:H.67, A:G.270
- Salt bridges: A:R.47, A:R.47
- pi-Stacking: A:Y.445
FAD.3: 39 residues within 4Å:- Chain B: I.14, G.15, G.17, I.18, A.19, L.38, E.39, A.40, R.41, G.45, G.46, R.47, I.61, G.62, A.63, S.64, W.65, H.67, Y.201, C.221, E.222, V.223, T.252, V.253, P.254, V.257, G.270, L.294, W.440, Y.445, A.449, Y.450, G.478, E.479, G.487, C.488, A.489, A.492
- Ligands: PG4.4
27 PLIP interactions:27 interactions with chain B- Hydrophobic interactions: B:L.294, B:A.449, B:Y.450
- Hydrogen bonds: B:G.17, B:A.19, B:A.40, B:R.41, B:R.47, B:S.64, B:W.65, B:W.65, B:Y.201, B:V.223, B:V.223, B:E.479, B:G.487, B:A.489
- Water bridges: B:I.18, B:G.20, B:G.46, B:R.47, B:R.47, B:L.48, B:H.67
- Salt bridges: B:R.47, B:R.47
- pi-Stacking: B:Y.445
- 2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
PG4.2: 9 residues within 4Å:- Chain A: W.65, H.67, L.173, W.174, A.195, L.294, Y.450, C.488
- Ligands: FAD.1
3 PLIP interactions:3 interactions with chain A- Water bridges: A:S.64, A:D.94, A:D.94
PG4.4: 10 residues within 4Å:- Chain B: W.65, H.67, L.173, W.174, L.294, L.375, Y.450, G.487, C.488
- Ligands: FAD.3
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:G.487
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Adachi, M.S. et al., Mechanistic and Structural Analyses of the Roles of Active Site Residues in Yeast Polyamine Oxidase Fms1: Characterization of the N195A and D94N Enzymes. Biochemistry (2012)
- Release Date
- 2012-10-17
- Peptides
- Polyamine oxidase FMS1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Adachi, M.S. et al., Mechanistic and Structural Analyses of the Roles of Active Site Residues in Yeast Polyamine Oxidase Fms1: Characterization of the N195A and D94N Enzymes. Biochemistry (2012)
- Release Date
- 2012-10-17
- Peptides
- Polyamine oxidase FMS1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B