SMTL ID : 4gg6.1 (1 other biounit)

Protein complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: R.79, N.81 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.81 NAG.2: 3 residues within 4Å: Chain A: V.119, N.121, E.169 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Broughton, S.E. et al., Biased T cell receptor usage directed against human leukocyte antigen DQ8-restricted gliadin peptides is associated with celiac disease. Immunity (2012)

Release Date

2012-10-24

Peptides

HLA class II histocompatibility antigen, DQ alpha 1 chain: A
HLA class II histocompatibility antigen, DQ beta 1 chain: B
T-CELL RECEPTOR, SP3.4 ALPHA CHAIN: C
T-CELL RECEPTOR, SP3.4 BETA CHAIN: D
Peptide from Alpha/beta-gliadin MM1: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

D
H

E
J

HLA class II histocompatibility antigen, DQ alpha 1 chain

HLA class II histocompatibility antigen, DQ beta 1 chain

T-CELL RECEPTOR, SP3.4 ALPHA CHAIN

T-CELL RECEPTOR, SP3.4 BETA CHAIN

Peptide from Alpha/beta-gliadin MM1

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