SMTL ID : 4ghp.1

Crystal Structure of D48V||A47D mutant of Human GLTP bound with 12:0 monosulfatide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x EIS: N-{(2S,3R,4E)-3-hydroxy-1-[(3-O-sulfo-beta-D-galactopyranosyl)oxy]octadec-4-en-2-yl}dodecanamide(Non-covalent)

EIS.1: 23 residues within 4Å: Chain A: F.34, F.42, I.45, G.51, N.52, K.55, L.92, A.93, W.96, G.100, F.103, L.136, H.140, F.148, Y.207, V.209 Chain B: V.41, P.44, I.45, H.140, I.147, F.148 Ligands: EIS.2 15 PLIP interactions: 11 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:F.42, A:W.96, A:F.103, A:F.103, A:F.103, A:L.136, A:F.148, B:V.41, B:P.44, B:I.45, B:F.148 Hydrogen bonds: A:N.52 Water bridges: A:N.52, A:A.93, A:A.93 EIS.2: 23 residues within 4Å: Chain A: V.41, P.44, I.45, H.140, I.147, F.148 Chain B: F.34, F.42, I.45, G.51, N.52, K.55, L.92, A.93, W.96, G.100, F.103, L.136, H.140, F.148, Y.207, V.209 Ligands: EIS.1 16 PLIP interactions: 12 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:F.42, B:W.96, B:F.103, B:F.103, B:F.103, B:L.136, B:F.148, A:V.41, A:P.44, A:I.45, A:F.148 Hydrogen bonds: B:N.52, B:Y.207 Water bridges: B:N.52, B:A.93, B:A.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Samygina, V.R. et al., Structural insights into lipid-dependent reversible dimerization of human GLTP. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-04-10

Peptides

Glycolipid transfer protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glycolipid transfer protein

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