SMTL ID : 4gi1.1

Structure of the complex of three phase partition treated lipase from Thermomyces lanuginosa with 16-hydroxypalmitic acid at 2.4 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.43 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: R.84, S.85, I.86, E.87, G.266, T.267 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.83, A:I.86, A:E.87 GOL.3: 7 residues within 4Å: Chain B: R.84, S.85, I.86, E.87, L.259, G.266, T.267 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:I.86, B:E.87, B:G.266, B:T.267, B:T.267

2 x 16Y: 16-hydroxyhexadecanoic acid(Non-covalent)

16Y.2: 15 residues within 4Å: Chain A: D.62, V.63, T.64, R.81, G.82, S.83, R.84, W.89, N.92, L.93, N.94, H.110, G.112, L.147, L.151 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:N.92, A:L.93, A:L.147 Hydrogen bonds: A:T.64, A:N.94 Salt bridges: A:H.110 16Y.4: 17 residues within 4Å: Chain B: D.62, V.63, T.64, R.81, G.82, S.83, R.84, S.85, N.88, W.89, N.92, L.93, N.94, H.110, G.112, L.147, L.151 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:N.92, B:L.93, B:L.147 Hydrogen bonds: B:T.64, B:T.64, B:N.94 Salt bridges: B:H.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, M. et al., Structure of the complex of three phase partition treated lipase from Thermomyces lanuginosa with 16-hydroxypalmitic acid at 2.4 A resolution. To be published

Release Date

2012-09-05

Peptides

Lipase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lipase

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