SMTL ID : 4giz.1 (1 other biounit)

Crystal structure of full-length human papillomavirus oncoprotein E6 in complex with LXXLL peptide of ubiquitin ligase E6AP at 2.55 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GLC- GLC- GLC- GLC- GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC-GLC-GLC-GLC-GLC.1: 19 residues within 4Å: Chain A: N.12, D.14, K.15, K.42, E.45, A.63, D.65, R.66, E.111, E.153, P.154, Y.155, F.156, Y.210, W.230, M.330, W.340, Y.341, R.344 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.153, A:R.344, A:R.344 Water bridges: A:E.153

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain B: C.102, C.105, C.135, C.138 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.102, B:C.105, B:C.135, B:C.138 ZN.3: 4 residues within 4Å: Chain B: C.29, C.32, C.62, C.65 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.29, B:C.32, B:C.62, B:C.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zanier, K. et al., Structural basis for hijacking of cellular LxxLL motifs by papillomavirus E6 oncoproteins. Science (2013)

Release Date

2013-01-23

Peptides

Maltose-binding periplasmic protein, UBIQUITIN LIGASE EA6P: chimeric protein: A
Protein E6: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Maltose-binding periplasmic protein, UBIQUITIN LIGASE EA6P: chimeric protein

Protein E6

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