SMTL ID : 4gnd.1 (1 other biounit)

Crystal Structure of NSD3 tandem PHD5-C5HCH domains

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.27 Å

Oligo State

monomer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.18, C.21, H.40, C.43 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.18, A:C.21, A:H.40, A:C.43 ZN.2: 4 residues within 4Å: Chain A: C.30, C.35, C.56, H.59 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.30, A:C.35, A:C.56, A:H.59 ZN.3: 4 residues within 4Å: Chain A: C.72, C.75, C.99, H.102 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.72, A:C.75, A:C.99, A:H.102 ZN.4: 4 residues within 4Å: Chain A: C.61, C.64, C.80, H.83 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.61, A:C.64, A:C.80, A:H.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

He, C. et al., The methyltransferase NSD3 has chromatin-binding motifs, PHD5-C5HCH, that are distinct from other NSD (nuclear receptor SET domain) family members in their histone H3 recognition. J.Biol.Chem. (2013)

Release Date

2013-01-02

Peptides

Histone-lysine N-methyltransferase NSD3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase NSD3

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