SMTL ID : 4go0.1

Crystal structure of the c707s mutant of c-terminal domain of 10'formyltetrahydrofolate dehydrogenase in complex with NADPH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.38 Å

Oligo State

homo-tetramer

Ligands

4 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 28 residues within 4Å: Chain A: V.185, I.186, P.187, W.188, N.189, M.194, K.212, A.214, Q.215, S.244, G.245, S.246, G.249, Q.250, F.263, T.264, G.265, S.266, V.269, I.273, E.288, L.289, G.290, S.322, E.419, F.421, L.449, F.487 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:P.187, A:T.264 Hydrogen bonds: A:I.186, A:K.212, A:Q.215, A:Q.215, A:G.245, A:Q.250, A:S.266, A:L.289, A:S.322, A:E.419 Salt bridges: A:K.212 NDP.2: 29 residues within 4Å: Chain B: V.185, I.186, P.187, W.188, N.189, M.194, K.212, A.214, Q.215, S.244, G.245, S.246, G.249, Q.250, F.263, T.264, G.265, S.266, V.269, H.272, I.273, E.288, L.289, G.290, S.322, E.419, F.421, L.449, F.487 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:P.187, B:T.264 Hydrogen bonds: B:I.186, B:K.212, B:Q.215, B:Q.215, B:G.245, B:Q.250, B:Q.250, B:S.266, B:H.272, B:L.289, B:S.322, B:E.419 Salt bridges: B:K.212 NDP.3: 28 residues within 4Å: Chain C: V.185, I.186, P.187, W.188, N.189, M.194, K.212, A.214, Q.215, G.245, S.246, G.249, Q.250, F.263, T.264, G.265, S.266, V.269, H.272, I.273, E.288, L.289, G.290, S.322, E.419, F.421, L.449, F.487 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:P.187, C:T.264 Hydrogen bonds: C:I.186, C:K.212, C:Q.215, C:Q.215, C:G.245, C:Q.250, C:S.266, C:E.288, C:L.289, C:E.419 Salt bridges: C:K.212 NDP.4: 30 residues within 4Å: Chain D: V.185, I.186, P.187, W.188, N.189, M.194, K.212, P.213, A.214, Q.215, S.244, G.245, S.246, G.249, Q.250, F.263, T.264, G.265, S.266, V.269, H.272, I.273, E.288, L.289, G.290, S.322, E.419, F.421, L.449, F.487 12 PLIP interactions: 12 interactions with chain D Hydrophobic interactions: D:T.264 Hydrogen bonds: D:I.186, D:K.212, D:Q.215, D:Q.215, D:G.245, D:Q.250, D:S.266, D:S.266, D:L.289, D:E.419 Salt bridges: D:K.212

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsybovsky, Y. et al., The mechanism of discrimination between oxidized and reduced coenzyme in the aldehyde dehydrogenase domain of Aldh1l1. Chem.Biol.Interact (2013)

Release Date

2013-01-23

Peptides

Cytosolic 10-formyltetrahydrofolate dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Cytosolic 10-formyltetrahydrofolate dehydrogenase

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