SMTL ID : 4gr1.1

THE BINDING OF THE RETRO-ANALOGUE OF GLUTATHIONE DISULFIDE TO GLUTATHIONE REDUCTASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 3 residues within 4Å: Chain A: A.195, H.219, R.224 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:R.218 Water bridges: A:A.195, A:A.195, A:A.195, A:H.219, A:R.224, A:R.224 Salt bridges: A:H.219, A:R.224 PO4.4: 3 residues within 4Å: Chain B: A.195, H.219, R.224 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:R.218 Water bridges: B:A.195, B:A.195, B:A.195, B:H.219, B:R.224, B:R.224 Salt bridges: B:H.219, B:R.224

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 38 residues within 4Å: Chain A: I.26, G.27, G.28, G.29, S.30, G.31, V.49, E.50, S.51, H.52, K.53, G.56, T.57, C.58, V.61, G.62, C.63, K.66, G.128, H.129, A.130, A.155, T.156, G.157, S.177, Y.197, I.198, R.291, L.298, G.330, D.331, L.337, L.338, T.339, P.340, A.342 Chain B: H.467, P.468 32 PLIP interactions: 30 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:T.57, A:I.198 Hydrogen bonds: A:G.28, A:S.30, A:S.30, A:G.31, A:S.51, A:H.52, A:T.57, A:C.58, A:K.66, A:A.130, A:A.130, A:G.157, A:Y.197, A:V.329, A:D.331, A:L.337, A:T.339, A:T.339, B:H.467 Water bridges: A:G.29, A:G.29, A:S.51, A:S.51, A:K.53, A:K.53, A:G.158, A:T.339, A:A.342, B:H.467 pi-Stacking: A:Y.197 FAD.5: 38 residues within 4Å: Chain A: H.467, P.468 Chain B: I.26, G.27, G.28, G.29, S.30, G.31, V.49, E.50, S.51, H.52, K.53, G.56, T.57, C.58, V.61, G.62, C.63, K.66, G.128, H.129, A.130, A.155, T.156, G.157, S.177, Y.197, I.198, R.291, L.298, G.330, D.331, L.337, L.338, T.339, P.340, A.342 32 PLIP interactions: 30 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:T.57, B:I.198 Hydrogen bonds: B:G.28, B:S.30, B:S.30, B:G.31, B:S.51, B:H.52, B:T.57, B:C.58, B:K.66, B:A.130, B:A.130, B:G.157, B:Y.197, B:V.329, B:D.331, B:L.337, B:T.339, B:T.339, A:H.467 Water bridges: B:G.29, B:G.29, B:S.51, B:S.51, B:K.53, B:K.53, B:G.158, B:T.339, B:A.342, A:H.467 pi-Stacking: B:Y.197

2 x RGS: 4N-MALONYL-CYSTEINYL-2,4-DIAMINOBUTYRATE DISULFIDE(Non-covalent)

RGS.3: 17 residues within 4Å: Chain A: C.58, V.59, V.64, L.110, Y.114, R.347 Chain B: S.402, F.403, T.404, P.405, M.406, H.467, P.468, T.469, E.472, E.473, T.476 15 PLIP interactions: 9 interactions with chain B, 6 interactions with chain A Hydrogen bonds: B:M.406, B:E.473, B:T.476, B:T.476, A:Y.114 Water bridges: B:T.404, B:H.467, B:E.472, B:E.472, A:R.37, A:R.347, A:R.347, A:R.347 Salt bridges: B:H.467, A:R.347 RGS.6: 17 residues within 4Å: Chain A: S.402, F.403, T.404, P.405, M.406, H.467, P.468, T.469, E.472, E.473, T.476 Chain B: C.58, V.59, V.64, L.110, Y.114, R.347 15 PLIP interactions: 9 interactions with chain A, 6 interactions with chain B Hydrogen bonds: A:M.406, A:E.473, A:T.476, A:T.476, B:Y.114 Water bridges: A:T.404, A:H.467, A:E.472, A:E.472, B:R.37, B:R.347, B:R.347, B:R.347 Salt bridges: A:H.467, B:R.347

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Janes, W. et al., The binding of the retro-analogue of glutathione disulfide to glutathione reductase. J.Biol.Chem. (1990)

Release Date

1991-10-15

Peptides

GLUTATHIONE REDUCTASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

GLUTATHIONE REDUCTASE

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