SMTL ID : 4grp.1

Crystallographic and biological characterization of N- and C- terminus mutants of human MIF

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.27 Å

Oligo State

homo-trimer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: Q.29, Q.32 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.29, A:Q.29, A:Q.32 Water bridges: A:Q.28 SO4.2: 4 residues within 4Å: Chain A: G.72, G.73, A.74, Q.75 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.73, A:A.74, A:Q.75, A:Q.75 SO4.3: 4 residues within 4Å: Chain B: G.72, G.73, A.74, Q.75 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.73, B:A.74, B:Q.75, B:Q.75 SO4.5: 4 residues within 4Å: Chain C: G.72, G.73, A.74, Q.75 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:G.73, C:A.74, C:Q.75, C:Q.75 SO4.6: 6 residues within 4Å: Chain A: H.66, Y.103 Chain B: H.66, Y.103 Chain C: H.66, Y.103 10 PLIP interactions: 5 interactions with chain C, 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: C:Y.103 Water bridges: C:H.66, C:Y.103, C:Y.103, A:Y.103, A:Y.103, B:Y.103 Salt bridges: C:H.66, A:H.66, B:H.66

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain B: A.88, R.92, I.93, S.94 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain C: T.27, Q.28, P.38 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fan, C. et al., Crystallographic and biological characterization of N- and C- terminus mutants of human MIF. To be Published

Release Date

2013-10-02

Peptides

Macrophage migration inhibitory factor: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Macrophage migration inhibitory factor