SMTL ID : 4gsu.3 (2 other biounits)

Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x DWZ: (2S,3R,4S)-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid(Non-covalent)

DWZ.1: 9 residues within 4Å: Chain A: M.174, Y.179, Y.189, S.202, G.203, V.204, H.223, G.224, C.225 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.179, A:H.223 Hydrogen bonds: A:H.223, A:H.223, A:C.225 Water bridges: A:Y.189, A:G.203, A:H.223 DWZ.2: 11 residues within 4Å: Chain A: F.14, T.16 Chain B: M.174, Y.179, Y.189, S.202, G.203, V.204, H.223, G.224, C.225 8 PLIP interactions: 7 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:Y.179, B:V.204, A:F.14 Hydrogen bonds: B:Y.189, B:H.223, B:H.223, B:C.225 Salt bridges: B:H.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, H.S. et al., Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-02-27

Peptides

Probable conserved lipoprotein LPPS: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Probable conserved lipoprotein LPPS

Related Entries With Identical Sequence