SMTL ID : 4gv1.1

PKB alpha in complex with AZD5363

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.49 Å

Oligo State

monomer

Ligands

1 x 0XZ: 4-amino-N-[(1S)-1-(4-chlorophenyl)-3-hydroxypropyl]-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidine-4-carboxamide(Non-covalent)

0XZ.1: 24 residues within 4Å: Chain A: L.16, G.17, K.18, G.19, G.22, K.23, V.24, A.37, K.39, L.41, T.71, M.87, E.88, Y.89, A.90, E.94, E.138, N.139, M.141, T.151, D.152, F.298 Ligands: GOL.3, GOL.5 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.37, A:K.39 Hydrogen bonds: A:A.90, A:E.94, A:T.151, A:D.152 Water bridges: A:E.138, A:E.138, A:D.152

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: K.14, D.294, T.295, R.296 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.14, A:K.14, A:D.294, A:T.295 GOL.3: 10 residues within 4Å: Chain A: K.39, L.41, I.46, E.51, H.54, T.55, E.58, D.152, G.154 Ligands: 0XZ.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.54 Water bridges: A:K.39, A:D.152, A:G.154 GOL.4: 6 residues within 4Å: Chain A: F.169, C.170, G.171, T.172, P.173, L.176 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.169 Water bridges: A:G.171, A:H.214 GOL.5: 7 residues within 4Å: Chain A: G.17, K.18, E.94, F.96, E.138, F.302 Ligands: 0XZ.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.18, A:K.18, A:E.94 Water bridges: A:E.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Addie, M. et al., Discovery of 4-Amino-N-[(1S)-1-(4-chlorophenyl)-3-hydroxypropyl]-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidine-4-carboxamide (AZD5363), an Orally Bioavailable, Potent Inhibitor of Akt Kinases. J.Med.Chem. (2013)

Release Date

2013-02-27

Peptides

RAC-alpha serine/threonine-protein kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RAC-alpha serine/threonine-protein kinase