SMTL ID : 4gw3.1

Crystal Structure of the Lipase from Proteus mirabilis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: N.230, D.233, D.276, Q.280, V.281, L.284 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.233, A:D.276, A:Q.280, A:L.284, H2O.2 CA.2: 2 residues within 4Å: Chain A: N.70, E.71 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.71, H2O.7, H2O.7

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.3: 4 residues within 4Å: Chain A: L.33, S.99, Q.100 Ligands: 1PE.6 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.33 Hydrogen bonds: A:S.99, A:S.99, A:Q.100

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 5 residues within 4Å: Chain A: I.220, Q.221, G.222, R.240, N.243 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:I.220, A:Q.221, A:R.240, A:R.240, A:N.243 Water bridges: A:I.220, A:N.251

2 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.5: 6 residues within 4Å: Chain A: L.33, I.39, V.40, F.67, F.163 Ligands: 1PE.6 No protein-ligand interaction detected (PLIP) 1PE.6: 6 residues within 4Å: Chain A: F.67, F.156, A.173, M.239 Ligands: IPA.3, 1PE.5 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Korman, T.P. et al., Crystal Structure of Proteus mirabilis Lipase, a Novel Lipase from the Proteus/Psychrophilic Subfamily of Lipase Family I.1. Plos One (2012)

Release Date

2013-02-06

Peptides

Putative lipase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative lipase

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