SMTL ID : 4gxl.1

The crystal structure of Galectin-8 C-CRD in complex with NDP52

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: H.20, M.21, N.44, G.143, D.144, I.145 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.20, A:M.21, A:N.44, A:I.145, A:I.145 GOL.2: 6 residues within 4Å: Chain A: H.65, N.67, R.69, N.78, W.85, E.88 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.69, A:N.78 Water bridges: A:N.67, A:R.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, S. et al., Sterical hindrance promotes selectivity of the autophagy cargo receptor NDP52 for the danger receptor galectin-8 in antibacterial autophagy. Sci.Signal. (2013)

Release Date

2013-05-08

Peptides

Galectin-8: A
Peptide from Calcium-binding and coiled-coil domain-containing protein 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Galectin-8

Peptide from Calcium-binding and coiled-coil domain-containing protein 2