SMTL ID : 4gxn.1

Diethylphosphonate Inhibited Structure of the Proteus mirabilis Lipase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: N.230, D.233, D.276, Q.280, V.281, L.284 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.233, A:D.276, A:Q.280, A:L.284, H2O.1

1 x DEP: DIETHYL PHOSPHONATE(Covalent)

DEP.2: 8 residues within 4Å: Chain A: Y.44, S.99, Q.100, V.125, S.129, L.180, L.254, H.274 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.125, A:L.180, A:L.254 Hydrogen bonds: A:Q.100 Water bridges: A:G.32 Salt bridges: A:H.274

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.3: 2 residues within 4Å: Chain A: I.39, F.67 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Korman, T.P. et al., Crystal Structure of Proteus mirabilis Lipase, a Novel Lipase from the Proteus/Psychrophilic Subfamily of Lipase Family I.1. Plos One (2012)

Release Date

2013-02-06

Peptides

Putative lipase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative lipase

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