SMTL ID : 4h0m.1 (1 other biounit)

X-Ray Crystal Structure of Phycocyanin from Synechococcus elongatus sp. PCC 7942

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-oligomer

Ligands

18 x CYC: PHYCOCYANOBILIN(Covalent)(Non-covalent)

CYC.1: 25 residues within 4Å: Chain A: V.60, T.67, N.73, N.74, F.75, A.76, G.81, K.84, C.85, R.87, D.88, I.89, Y.91, Y.92, Y.111, I.119, F.123, L.125, W.129, Y.130 Chain D: R.58, Y.75, T.76, N.77, M.80 Ligand excluded by PLIP CYC.2: 19 residues within 4Å: Chain B: L.67, N.73, A.74, R.78, R.79, A.82, C.83, R.85, D.86, M.87, I.89, R.109, C.110, L.114, Y.118, L.121, V.123, S.127, V.128 Ligand excluded by PLIP CYC.3: 21 residues within 4Å: Chain A: F.29 Chain B: A.33, N.36, K.37, D.40, T.41, N.43, R.44, V.143, S.144, D.145, I.149, T.150, Q.151, G.152, C.154 Chain K: R.33, Q.34, D.146, D.149, E.150 Ligand excluded by PLIP CYC.4: 25 residues within 4Å: Chain C: V.60, T.67, N.73, N.74, F.75, A.76, G.81, K.84, C.85, R.87, D.88, I.89, Y.91, Y.92, Y.111, I.119, F.123, L.125, W.129, Y.130 Chain F: R.58, I.68, Y.75, T.76, N.77 Ligand excluded by PLIP CYC.5: 19 residues within 4Å: Chain D: L.67, N.73, A.74, R.79, A.82, C.83, R.85, D.86, M.87, I.89, R.109, C.110, L.114, Y.118, L.121, V.123, P.124, S.127, V.128 Ligand excluded by PLIP CYC.6: 20 residues within 4Å: Chain C: F.29 Chain D: A.33, N.36, K.37, D.40, N.43, V.143, S.144, D.145, R.146, I.149, T.150, Q.151, G.152, C.154 Chain I: R.33, Q.34, D.146, D.149, E.150 Ligand excluded by PLIP CYC.7: 22 residues within 4Å: Chain B: R.58, Y.75, T.76, N.77, M.80 Chain E: V.60, T.67, N.73, N.74, F.75, A.76, G.81, K.84, C.85, R.87, D.88, Y.91, Y.92, Y.111, F.123, L.125, W.129 Ligand excluded by PLIP CYC.8: 17 residues within 4Å: Chain F: N.73, A.74, R.79, A.82, C.83, R.85, D.86, M.87, I.89, R.109, L.114, Y.118, L.121, V.123, P.124, S.127, V.128 Ligand excluded by PLIP CYC.9: 21 residues within 4Å: Chain E: F.29 Chain F: A.33, N.36, K.37, D.40, T.41, N.43, R.44, V.143, S.144, D.145, I.149, T.150, Q.151, G.152, C.154 Chain G: R.33, Q.34, D.146, D.149, E.150 Ligand excluded by PLIP CYC.10: 24 residues within 4Å: Chain G: V.60, T.67, N.73, N.74, F.75, A.76, G.81, K.84, C.85, D.88, Y.91, Y.111, L.112, I.119, F.123, L.125, W.129, Y.130 Chain J: R.58, I.68, Y.75, T.76, N.77, M.80 Ligand excluded by PLIP CYC.11: 17 residues within 4Å: Chain H: L.67, N.73, A.74, R.78, R.79, A.82, C.83, D.86, M.87, I.89, R.109, L.114, L.121, V.123, P.124, S.127, V.128 Ligand excluded by PLIP CYC.12: 21 residues within 4Å: Chain E: R.33, Q.34, D.146, D.149, E.150 Chain G: L.25, F.29 Chain H: N.36, K.37, D.40, T.41, N.43, R.44, V.143, S.144, D.145, I.149, T.150, Q.151, G.152, C.154 Ligand excluded by PLIP CYC.13: 26 residues within 4Å: Chain I: V.60, T.67, N.73, N.74, F.75, A.76, G.81, K.84, C.85, R.87, D.88, I.89, Y.91, Y.111, L.112, I.119, F.123, L.125, W.129, Y.130 Chain L: R.58, I.68, Y.75, T.76, N.77, M.80 Ligand excluded by PLIP CYC.14: 20 residues within 4Å: Chain J: L.67, N.73, A.74, R.78, R.79, A.82, C.83, D.86, M.87, I.89, Y.93, R.109, C.110, L.114, Y.118, L.121, V.123, P.124, S.127, V.128 Ligand excluded by PLIP CYC.15: 21 residues within 4Å: Chain C: R.33, Q.34, D.146, D.149, E.150 Chain I: F.29 Chain J: A.33, N.36, K.37, D.40, T.41, N.43, R.44, V.143, S.144, D.145, I.149, T.150, Q.151, G.152, C.154 Ligand excluded by PLIP CYC.16: 24 residues within 4Å: Chain H: R.58, I.68, Y.75, T.76, N.77, M.80 Chain K: V.60, T.67, N.73, N.74, F.75, A.76, K.84, C.85, R.87, D.88, Y.91, Y.92, I.95, Y.111, F.123, L.125, W.129, Y.130 Ligand excluded by PLIP CYC.17: 20 residues within 4Å: Chain L: L.60, L.67, N.73, A.74, R.79, A.82, C.83, D.86, M.87, I.89, Y.93, R.109, C.110, L.114, Y.118, L.121, V.123, P.124, S.127, V.128 Ligand excluded by PLIP CYC.18: 21 residues within 4Å: Chain A: R.33, Q.34, D.146, D.149, E.150 Chain K: L.25, F.29 Chain L: A.33, N.36, K.37, D.40, T.41, R.44, V.143, S.144, D.145, R.146, T.150, Q.151, G.152, C.154 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marx, A. et al., Allophycocyanin and phycocyanin crystal structures reveal facets of phycobilisome assembly. Biochim.Biophys.Acta (2013)

Release Date

2013-03-06

Peptides

C-phycocyanin alpha chain: ACEGIK
C-phycocyanin beta chain: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

G
G

I
I

K
K

B
B

D
D

F
F

H
H

J
J

L
L

C-phycocyanin alpha chain

C-phycocyanin beta chain

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