SMTL ID : 4h1h.2 (1 other biounit)

Crystal structure of MccF homolog from Listeria monocytogenes EGD-e

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.46 Å

Oligo State

homo-hexamer

Ligands

12 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.22, G.87, G.88, S.114, H.136, H.299 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.87, A:S.114, A:S.114 Salt bridges: A:R.22 SO4.2: 3 residues within 4Å: Chain A: T.272, A.273 Chain D: R.64 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain D Hydrogen bonds: A:A.273 Water bridges: A:E.274 Salt bridges: D:R.64 SO4.3: 7 residues within 4Å: Chain B: R.22, I.86, G.87, G.88, S.114, H.136, H.299 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:G.87, B:G.88, B:S.114, B:S.114, B:D.115 Salt bridges: B:R.22, B:H.136, B:H.299 SO4.4: 8 residues within 4Å: Chain B: D.29, N.30 Chain D: D.29, N.30 Chain F: D.29, N.30 Ligands: SO4.8, SO4.12 11 PLIP interactions: 3 interactions with chain F, 4 interactions with chain D, 4 interactions with chain B Hydrogen bonds: F:D.29, F:N.30, F:N.30, D:D.29, D:D.29, D:N.30, D:N.30, B:D.29, B:D.29, B:N.30, B:N.30 SO4.5: 6 residues within 4Å: Chain C: R.22, G.87, G.88, S.114, H.136, H.299 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:G.87, C:S.114, C:S.114 Salt bridges: C:R.22 SO4.6: 3 residues within 4Å: Chain C: T.272, A.273 Chain F: R.64 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain F Hydrogen bonds: C:A.273 Water bridges: C:E.274 Salt bridges: F:R.64 SO4.7: 7 residues within 4Å: Chain D: R.22, I.86, G.87, G.88, S.114, H.136, H.299 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:G.87, D:G.88, D:S.114, D:S.114, D:D.115 Salt bridges: D:R.22, D:H.136, D:H.299 SO4.8: 8 residues within 4Å: Chain B: D.29, N.30 Chain D: D.29, N.30 Chain F: D.29, N.30 Ligands: SO4.4, SO4.12 11 PLIP interactions: 3 interactions with chain F, 4 interactions with chain D, 4 interactions with chain B Hydrogen bonds: F:D.29, F:N.30, F:N.30, D:D.29, D:D.29, D:N.30, D:N.30, B:D.29, B:D.29, B:N.30, B:N.30 SO4.9: 6 residues within 4Å: Chain E: R.22, G.87, G.88, S.114, H.136, H.299 4 PLIP interactions: 4 interactions with chain E Hydrogen bonds: E:G.87, E:S.114, E:S.114 Salt bridges: E:R.22 SO4.10: 3 residues within 4Å: Chain B: R.64 Chain E: T.272, A.273 3 PLIP interactions: 2 interactions with chain E, 1 interactions with chain B Hydrogen bonds: E:A.273 Water bridges: E:E.274 Salt bridges: B:R.64 SO4.11: 7 residues within 4Å: Chain F: R.22, I.86, G.87, G.88, S.114, H.136, H.299 8 PLIP interactions: 8 interactions with chain F Hydrogen bonds: F:G.87, F:G.88, F:S.114, F:S.114, F:D.115 Salt bridges: F:R.22, F:H.136, F:H.299 SO4.12: 8 residues within 4Å: Chain B: D.29, N.30 Chain D: D.29, N.30 Chain F: D.29, N.30 Ligands: SO4.4, SO4.8 11 PLIP interactions: 3 interactions with chain F, 4 interactions with chain D, 4 interactions with chain B Hydrogen bonds: F:D.29, F:N.30, F:N.30, D:D.29, D:D.29, D:N.30, D:N.30, B:D.29, B:D.29, B:N.30, B:N.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Crystal structure of MccF homolog from Listeria monocytogenes EGD-e. TO BE PUBLISHED

Release Date

2012-09-26

Peptides

Lmo1638 protein: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

Lmo1638 protein

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