SMTL ID : 4h5t.1

HSC70 NBD with ADP and Mg

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 20 residues within 4Å: Chain A: G.11, T.12, T.13, Y.14, G.200, G.201, G.229, E.230, E.267, K.270, R.271, S.274, G.337, G.338, S.339, R.341, I.342, D.365 Ligands: MG.2, PO4.4 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:T.13, A:T.13, A:Y.14, A:G.201, A:E.267, A:K.270, A:R.271, A:R.271, A:S.274, A:G.338 Water bridges: A:Y.14, A:G.202, A:G.202, A:E.230, A:R.341, A:D.365

2 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.2: 2 residues within 4Å: Ligands: ADP.1, PO4.4 No protein-ligand interaction detected (PLIP) MG.3: 2 residues within 4Å: Chain A: E.26, R.35 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:E.26, H2O.5, H2O.8, H2O.8, H2O.9

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.4: 9 residues within 4Å: Chain A: G.11, T.12, K.70, P.146, E.174, T.203, D.205 Ligands: ADP.1, MG.2 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:T.12, A:T.12, A:T.12, A:E.174, A:T.203 Water bridges: A:K.70, A:K.70, A:E.174, A:G.201, A:T.203, A:D.205, A:D.205 Salt bridges: A:K.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., New crystal structures of HSC-70 ATP binding domain confirm the role of individual binding pockets and suggest a new method of inhibition. Biochimie (2015)

Release Date

2014-03-19

Peptides

Heat shock cognate 71 kDa protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heat shock cognate 71 kDa protein

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