SMTL ID : 4h6t.1

Crystal structure of prethrombin-2 mutant E14eA/D14lA/E18A/S195A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

7 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 2 residues within 4Å: Chain A: P.70, Q.71 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.71 PO4.2: 3 residues within 4Å: Chain A: H.134, R.136, W.296 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.145 Salt bridges: A:H.134, A:R.136 PO4.3: 5 residues within 4Å: Chain A: I.214, V.215, R.217, F.233, C.234 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:V.215, A:V.215, A:R.217, A:C.234 Salt bridges: A:R.217 PO4.4: 4 residues within 4Å: Chain A: F.7, D.169, R.170, K.294 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.170 Salt bridges: A:K.294 PO4.5: 5 residues within 4Å: Chain A: D.144, R.145, R.227, T.229, N.231 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:D.144, A:T.229, A:T.229, A:N.231 Water bridges: A:R.145, A:R.227, A:R.292, A:R.292 Salt bridges: A:R.145, A:R.227 PO4.6: 8 residues within 4Å: Chain A: E.55, G.57, M.58, S.59, P.60, K.112, H.113, Y.161 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.55, A:E.55, A:G.57, A:M.58, A:S.59, A:G.111, A:H.113 PO4.7: 1 residues within 4Å: Chain A: T.116 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pozzi, N. et al., Autoactivation of thrombin precursors. J.Biol.Chem. (2013)

Release Date

2013-03-13

Peptides

Prothrombin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Prothrombin