SMTL ID : 4h7i.1

Crystal structure of haloalkane dehalogenase LinB L138I mutant from Sphingobium sp. MI1205

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: P.175, I.178 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:P.175, A:I.178, H2O.2, H2O.3

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: N.38, W.109, F.169, W.207, P.208, I.211 Ligand excluded by PLIP CL.3: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 4 residues within 4Å: Chain A: T.264, F.289, R.292, L.293 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.292, A:R.292 Water bridges: A:T.264 GOL.5: 3 residues within 4Å: Chain A: E.139, A.214, G.215 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.139

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Okai, M. et al., Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205. J.Bacteriol. (2013)

Release Date

2013-06-05

Peptides

Haloalkane dehalogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Haloalkane dehalogenase