SMTL ID : 4hag.1

Crystal structure of fc-fragment of human IgG2 antibody (centered crystal form)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG- BMA- MAN- NAG- MAN- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-MAN-NAG.1: 11 residues within 4Å: Chain A: F.17, F.19, K.22, T.36, V.38, V.40, D.41, Q.71, N.73, T.75, R.77 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.77, A:K.22, A:K.22, A:R.77 NAG-NAG-BMA-MAN-NAG-MAN-NAG.2: 11 residues within 4Å: Chain B: F.17, F.19, K.22, T.36, V.38, V.40, D.41, Q.71, N.73, T.75, R.77 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.77, B:K.22, B:K.22, B:R.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Teplyakov, A. et al., IgG2 Fc structure and the dynamic features of the IgG CH2-CH3 interface. Mol.Immunol. (2013)

Release Date

2013-06-12

Peptides

Ig gamma-2 chain C region: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Ig gamma-2 chain C region

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