SMTL ID : 4hbq.3 (2 other biounits)

Crystal structure of a loop deleted mutant of Human MAdCAM-1 D1D2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.79, F.81 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.79, A:R.79 Salt bridges: A:R.79 SO4.3: 5 residues within 4Å: Chain B: G.138, Q.140, R.164, L.165, P.166 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.140, B:L.165

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 2 residues within 4Å: Chain A: T.43 Chain B: N.61 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.61

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Springer, T. et al., A Different Fold with an Integrin-Binding Loop Specialized for Flexibility in Mucosal Addressin Cell Adhesion Molecule-1. TO BE PUBLISHED

Release Date

2013-01-23

Peptides

Mucosal addressin cell adhesion molecule 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mucosal addressin cell adhesion molecule 1

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