SMTL ID : 4hef.1

Structure of avibactam bound to Pseudomonas aeruginosa AmpC

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: A.128, Q.129, D.132 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.128 GOL.2: 6 residues within 4Å: Chain A: P.240, E.241, R.245, A.248, Q.249, D.252 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.245, A:Q.249, A:D.252 Water bridges: A:E.241

1 x NXL: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide(Covalent)

NXL.3: 11 residues within 4Å: Chain A: G.61, S.62, L.117, Q.118, Y.149, N.151, K.314, T.315, G.316, S.317, N.345 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:S.62, A:Q.118, A:Y.149, A:Y.149, A:N.151, A:T.315, A:T.315, A:S.317, A:N.345 Water bridges: A:Q.118, A:N.286, A:N.286, A:T.315 Salt bridges: A:K.314

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lahiri, S.D. et al., Structural Insight into Potent Broad-Spectrum Inhibition with Reversible Recyclization Mechanism: Avibactam in Complex with CTX-M-15 and Pseudomonas aeruginosa AmpC beta-Lactamases. Antimicrob.Agents Chemother. (2013)

Release Date

2013-06-05

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase