SMTL ID : 4heq.1

The crystal structure of flavodoxin from Desulfovibrio gigas

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

homo-dimer

Ligands

2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 18 residues within 4Å: Chain A: S.10, T.11, T.12, G.13, N.14, T.15, S.58, T.59, W.60, G.61, E.64, C.93, G.94, D.95, Y.98, Y.100, F.101, C.102 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:W.60, A:W.60 Hydrogen bonds: A:T.11, A:T.12, A:T.12, A:N.14, A:N.14, A:T.15, A:S.58, A:S.58, A:T.59, A:T.59, A:D.95, A:Y.100, A:C.102 Water bridges: A:T.12, A:Y.100 pi-Stacking: A:Y.98, A:Y.98 FMN.2: 18 residues within 4Å: Chain B: S.10, T.11, T.12, G.13, N.14, T.15, S.58, T.59, W.60, G.61, E.64, C.93, G.94, D.95, Y.98, Y.100, F.101, C.102 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:W.60, B:W.60 Hydrogen bonds: B:T.11, B:T.12, B:T.12, B:N.14, B:N.14, B:T.15, B:T.15, B:S.58, B:S.58, B:T.59, B:T.59, B:D.95, B:Y.100, B:C.102 Water bridges: B:G.94 pi-Stacking: B:Y.98, B:Y.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hsieh, Y.C. et al., Crystal Structure of Dimeric Flavodoxin from Desulfovibrio gigas Suggests a Potential Binding Region for the Electron-Transferring Partner. Int J Mol Sci (2013)

Release Date

2013-01-30

Peptides

Flavodoxin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Flavodoxin