SMTL ID : 4hfn.1

X-ray Crystal Structure of a Ternary Complex of Double Bond Reductase from Nicotiana tabacum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 28 residues within 4Å: Chain A: P.54, M.136, T.140, A.161, G.164, A.165, V.166, A.185, G.186, K.190, Y.206, N.230, V.231, C.252, G.253, M.254, I.255, S.256, Y.258, F.282, L.283, V.284, L.327, F.328, G.330, N.332 Chain B: I.273 Ligands: CIY.2 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:T.140 Hydrogen bonds: A:A.165, A:V.166, A:G.186, A:K.190, A:Y.206, A:N.230, A:N.230, A:I.255, A:Y.258, A:F.282, A:V.284, A:N.332, A:N.332, A:G.334 Water bridges: A:D.53, A:D.53, A:Y.55, A:S.163, A:G.164, A:G.167, A:Y.206, A:K.207 Salt bridges: A:K.190 NAP.3: 23 residues within 4Å: Chain A: I.273 Chain B: P.54, M.136, T.140, A.161, G.164, A.165, V.166, A.185, G.186, K.190, Y.206, N.230, V.231, C.252, G.253, M.254, I.255, S.256, F.282, L.283, V.284, G.334 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:T.140 Hydrogen bonds: B:A.165, B:V.166, B:G.186, B:K.190, B:Y.206, B:N.230, B:N.230, B:C.252, B:M.254, B:I.255, B:V.284 Water bridges: B:Y.55, B:A.161, B:A.161, B:G.164, B:G.167, B:Y.206, B:K.207, B:N.332, B:G.334 Salt bridges: B:K.190 pi-Cation interactions: B:K.207

1 x CIY: (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enal(Non-covalent)

CIY.2: 7 residues within 4Å: Chain A: Y.55, Y.258, L.283, F.285 Chain B: F.270, I.273 Ligands: NAP.1 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:Y.55, A:L.283, B:F.270, B:I.273 Hydrogen bonds: A:Y.55 Water bridges: B:R.276

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mansell, D.J. et al., Biocatalytic Asymmetric Alkene Reduction: Crystal Structure and Characterization of a Double Bond Reductase fromNicotiana tabacum. ACS Catal (2013)

Release Date

2013-01-30

Peptides

Allyl alcohol dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Allyl alcohol dehydrogenase

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