SMTL ID : 4hi5.1

crystal structure of F37A mutant of borna disease virus matrix protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.60 Å

Oligo State

homo-tetramer

Ligands

4 x C5P: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)

C5P.1: 8 residues within 4Å: Chain A: Q.36, A.37, L.38, H.112 Chain C: K.111, N.115 Ligands: C5P.3, C5P.4 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.37, A:A.37, A:H.112 pi-Stacking: A:H.112 C5P.2: 8 residues within 4Å: Chain B: Q.36, A.37, L.38, H.112 Chain D: K.111, N.115 Ligands: C5P.3, C5P.4 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:A.37, B:A.37, B:H.112 pi-Stacking: B:H.112 C5P.3: 8 residues within 4Å: Chain B: K.111, N.115 Chain C: Q.36, A.37, L.38, H.112 Ligands: C5P.1, C5P.2 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:A.37, C:A.37, C:H.112 pi-Stacking: C:H.112 C5P.4: 8 residues within 4Å: Chain A: K.111, N.115 Chain D: Q.36, A.37, L.38, H.112 Ligands: C5P.1, C5P.2 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:A.37, D:A.37, D:H.112 pi-Stacking: D:H.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dautel, P. et al., Matrix protein variants provide support for alternative borna disease virus infection pathway. To be Published

Release Date

2013-10-30

Peptides

Matrix protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Matrix protein