SMTL ID : 4hi9.1

1.2 structure of integrin-linked kinase ankyrin repeat domain in complex with PINCH1 LIM1 domain collected at wavelength 0.91974

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 10 residues within 4Å: Chain A: R.48, L.78, S.81, H.82 Chain B: A.43, Q.44, R.60, Y.62, L.70, F.71 13 PLIP interactions: 8 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:Y.62, B:Y.62, A:S.81, A:S.81 Water bridges: B:Q.44, B:Q.44, B:Q.44, B:R.60, B:R.60, A:R.48 Salt bridges: B:R.60, A:R.48, A:H.82

10 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 4 residues within 4Å: Chain A: G.83, Q.117, Q.119, V.120 Ligand excluded by PLIP IOD.3: 4 residues within 4Å: Chain A: G.16, R.51, A.53, V.54 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain A: T.172 Ligand excluded by PLIP IOD.5: 4 residues within 4Å: Chain A: W.115, G.116 Chain B: R.16, C.17 Ligand excluded by PLIP IOD.6: 4 residues within 4Å: Chain A: D.8, I.9, Q.12, W.24 Ligand excluded by PLIP IOD.7: 4 residues within 4Å: Chain A: S.52, H.84, D.86, I.87 Ligand excluded by PLIP IOD.8: 5 residues within 4Å: Chain A: S.52, E.56, D.86, I.87, K.90 Ligand excluded by PLIP IOD.9: 3 residues within 4Å: Chain A: A.126, R.156, M.160 Ligand excluded by PLIP IOD.12: 5 residues within 4Å: Chain A: W.115 Chain B: E.15, R.16, Y.35, K.61 Ligand excluded by PLIP IOD.13: 2 residues within 4Å: Chain B: N.29, L.34 Ligand excluded by PLIP

2 x ZN: ZINC ION(Non-covalent)

ZN.10: 5 residues within 4Å: Chain B: C.14, R.16, C.17, H.36, C.39 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.14, B:C.17, B:H.36, B:C.39 ZN.11: 5 residues within 4Å: Chain B: C.42, Q.44, C.45, C.63, D.66 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.42, B:C.45, B:C.63, B:D.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stiegler, A.L. et al., 1.2 structure of integrin-linked kinase ankyrin repeat domain in complex with PINCH1 LIM1 domain collected at wavelength 0.91974. To be Published

Release Date

2013-12-11

Peptides

Integrin-linked protein kinase: A
LIM and senescent cell antigen-like-containing domain protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Integrin-linked protein kinase

LIM and senescent cell antigen-like-containing domain protein 1

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