SMTL ID : 4hjh.2 (1 other biounit)

Iodide SAD phased crystal structure of a phosphoglucomutase from Brucella melitensis complexed with glucose-6-phosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

32 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 1 residues within 4Å: Chain A: N.25 Ligand excluded by PLIP IOD.2: 3 residues within 4Å: Chain A: Q.45, P.101, R.122 Ligand excluded by PLIP IOD.3: 1 residues within 4Å: Chain A: T.200 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain A: L.193 Ligand excluded by PLIP IOD.5: 2 residues within 4Å: Chain A: L.179, H.364 Ligand excluded by PLIP IOD.6: 1 residues within 4Å: Chain A: R.180 Ligand excluded by PLIP IOD.7: 2 residues within 4Å: Chain A: G.209, R.210 Ligand excluded by PLIP IOD.8: 1 residues within 4Å: Chain A: A.207 Ligand excluded by PLIP IOD.9: 1 residues within 4Å: Chain A: Q.232 Ligand excluded by PLIP IOD.10: 2 residues within 4Å: Chain A: V.284, E.422 Ligand excluded by PLIP IOD.11: 1 residues within 4Å: Chain A: R.301 Ligand excluded by PLIP IOD.12: 2 residues within 4Å: Chain A: K.296, L.298 Ligand excluded by PLIP IOD.13: 1 residues within 4Å: Chain A: A.312 Ligand excluded by PLIP IOD.14: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.15: 1 residues within 4Å: Chain A: L.466 Ligand excluded by PLIP IOD.16: 2 residues within 4Å: Chain A: N.389, P.446 Ligand excluded by PLIP IOD.17: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.18: 2 residues within 4Å: Chain A: D.457, T.458 Ligand excluded by PLIP IOD.19: 2 residues within 4Å: Chain A: P.28, Y.138 Ligand excluded by PLIP IOD.20: 1 residues within 4Å: Chain A: E.23 Ligand excluded by PLIP IOD.21: 2 residues within 4Å: Chain A: A.445, P.446 Ligand excluded by PLIP IOD.22: 3 residues within 4Å: Chain A: P.60, I.213, F.214 Ligand excluded by PLIP IOD.23: 2 residues within 4Å: Chain A: L.68 Ligands: IOD.24 Ligand excluded by PLIP IOD.24: 3 residues within 4Å: Chain A: G.26, L.27 Ligands: IOD.23 Ligand excluded by PLIP IOD.25: 2 residues within 4Å: Chain A: M.195, T.199 Ligand excluded by PLIP IOD.26: 3 residues within 4Å: Chain A: R.191, R.210, D.212 Ligand excluded by PLIP IOD.27: 1 residues within 4Å: Chain A: E.365 Ligand excluded by PLIP IOD.28: 1 residues within 4Å: Chain A: L.411 Ligand excluded by PLIP IOD.29: 1 residues within 4Å: Chain A: S.135 Ligand excluded by PLIP IOD.30: 1 residues within 4Å: Chain A: P.142 Ligand excluded by PLIP IOD.31: 3 residues within 4Å: Chain A: T.156, D.157, A.158 Ligand excluded by PLIP IOD.32: 1 residues within 4Å: Chain A: T.396 Ligand excluded by PLIP

1 x G6Q: GLUCOSE-6-PHOSPHATE(Non-covalent)

G6Q.33: 19 residues within 4Å: Chain A: T.14, S.15, R.18, S.108, H.109, E.220, R.251, V.302, G.303, S.304, E.326, N.328, R.350, R.440, S.442, G.443, N.444, R.449, Y.451 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:R.18, A:R.251, A:G.303, A:S.304, A:E.326, A:N.328, A:R.350, A:G.443, A:N.444, A:Y.451 Water bridges: A:K.118, A:E.220, A:E.220, A:R.251, A:R.440, A:S.442 Salt bridges: A:H.109, A:R.440, A:R.449

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.34: 3 residues within 4Å: Chain A: A.277, R.293, F.294 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.277

1 x MG: MAGNESIUM ION(Non-covalent)

MG.35: 4 residues within 4Å: Chain A: S.108, D.246, D.248, D.250 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:S.108, A:D.246, A:D.248, A:D.250

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fairman, J.W. et al., Iodide SAD phased crystal structure of a phosphoglucomutase from Brucella melitensis complexed with glucose-6-phosphate. TO BE PUBLISHED

Release Date

2012-11-21

Peptides

Phosphomannomutase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Phosphomannomutase

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