SMTL ID : 4hjj.1

Structure Reveals Function of the Dual Variable Domain Immunoglobulin (DVD-Ig) Molecule

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-oligomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: P.107, G.108 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.108 Water bridges: A:H.109, A:H.109 GOL.3: 12 residues within 4Å: Chain B: F.300, P.301, V.303, S.311, L.312, S.313 Chain C: Q.274, E.275, S.276, S.290, S.291, T.292 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain C Hydrogen bonds: B:F.300, B:S.313, C:S.276, C:S.291, C:T.292

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain B: F.24, S.28, L.29, S.30, K.73, S.76, K.77 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:L.29, B:S.30, B:S.30 Salt bridges: B:K.73

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 3 residues within 4Å: Chain C: K.39, Q.42, K.45 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jakob, C.G. et al., Structure reveals function of the dual variable domain immunoglobulin (DVD-Ig[TM]) molecule. MAbs (2013)

Release Date

2013-05-08

Peptides

Interleukin-18: A
Anti-IL12 Anti-IL18 DFab Heavy Chain: B
Anti-IL12 Anti-IL18 DFab Light Chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Interleukin-18

Anti-IL12 Anti-IL18 DFab Heavy Chain

Anti-IL12 Anti-IL18 DFab Light Chain