SMTL ID : 4hk4.1

Crystal structure of apo Tyrosine-tRNA ligase mutant protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 8 residues within 4Å: Chain A: S.38, H.42, H.45, K.204, M.205, S.206, S.207 Ligands: PEG.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.38, A:M.205, A:S.207 PEG.2: 9 residues within 4Å: Chain A: F.35, H.42, G.44, H.45, Q.48, L.196, K.204, M.205 Ligands: PEG.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.48, A:L.196, A:M.205 PEG.3: 8 residues within 4Å: Chain B: S.38, H.42, H.45, K.204, M.205, S.206, S.207 Ligands: PEG.4 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.38, B:M.205, B:S.207 PEG.4: 9 residues within 4Å: Chain B: F.35, H.42, G.44, H.45, Q.48, L.196, K.204, M.205 Ligands: PEG.3 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.48, B:L.196, B:M.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, Y. et al., Crystal structure of apo Tyrosine-tRNA ligase mutant protein. To be Published

Release Date

2013-04-17

Peptides

Tyrosine--tRNA ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Tyrosine--tRNA ligase