SMTL ID : 4hkx.1

Influenza hemagglutinin in complex with CH67 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 7 residues within 4Å: Chain A: N.25, E.27, E.47, N.48, C.51, S.97, R.181 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:E.27 Hydrogen bonds: A:N.25, A:N.48, A:R.181, A:R.181 Water bridges: A:G.49 NAG.2: 2 residues within 4Å: Chain A: N.15, E.47 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schmidt, A.G. et al., Preconfiguration of the antigen-binding site during affinity maturation of a broadly neutralizing influenza virus antibody. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2012-11-21

Peptides

Hemagglutinin HA1: A
CH67 heavy chain: B
CH67 light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
A

C
B

Hemagglutinin HA1

CH67 heavy chain

CH67 light chain