SMTL ID : 4hmy.1

Structural basis for recruitment and activation of the AP-1 clathrin adaptor complex by Arf1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 7.00 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.1: 23 residues within 4Å: Chain E: L.16, D.17, A.18, A.19, G.20, K.21, T.22, T.23, T.36, I.37, P.38, T.39, D.58, G.60, G.61, L.62, N.117, K.118, D.120, C.150, A.151, T.152 Ligands: MG.2 24 PLIP interactions: 24 interactions with chain E Hydrogen bonds: E:A.18, E:A.19, E:G.20, E:K.21, E:T.22, E:T.22, E:T.23, E:T.23, E:I.37, E:T.39, E:T.39, E:D.58, E:G.61, E:N.117, E:K.118, E:K.118, E:A.151, E:T.152, E:T.152, E:T.152 Salt bridges: E:K.21, E:K.21, E:D.120 pi-Cation interactions: E:K.118

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain E: T.22, I.37, P.38, T.39 Ligands: GTP.1 2 PLIP interactions: 2 interactions with chain E Metal complexes: E:T.22, E:T.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ren, X. et al., Structural Basis for Recruitment and Activation of the AP-1 Clathrin Adaptor Complex by Arf1. Cell(Cambridge,Mass.) (2013)

Release Date

2013-03-06

Peptides

AP-1 complex subunit gamma-1: A
AP-1 complex subunit beta-1: B
AP-1 complex subunit mu-1: C
AP-1 complex subunit sigma-3: D
ADP-ribosylation factor 1: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
M

D
S

E
C

AP-1 complex subunit gamma-1

AP-1 complex subunit beta-1

AP-1 complex subunit mu-1

AP-1 complex subunit sigma-3

ADP-ribosylation factor 1

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