SMTL ID : 4hs9.1

Methanol tolerant mutant of the Proteus mirabilis lipase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: N.230, D.233, D.276, Q.280, V.281, L.284 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.233, A:D.276, A:Q.280, A:L.284, H2O.1

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: H.31, S.37, P.43, Y.44 Ligand excluded by PLIP

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: Y.46, N.279 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.279 Water bridges: A:N.279

1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.4: 10 residues within 4Å: Chain A: L.33, A.34, F.36, I.39, V.40, F.67, F.156, I.159, F.163 Ligands: PE4.5 No protein-ligand interaction detected (PLIP)

1 x PE4: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL(Non-functional Binders)

PE4.5: 15 residues within 4Å: Chain A: L.33, I.39, Y.44, F.67, S.99, Q.100, I.160, S.164, H.166, D.172, A.176, L.177, H.274, F.275 Ligands: 1PE.4 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.44, A:F.275 Hydrogen bonds: A:S.99, A:S.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Korman, T.P. et al., Dieselzymes: development of a stable and methanol tolerant lipase for biodiesel production by directed evolution. Biotechnol Biofuels (2013)

Release Date

2013-05-22

Peptides

Lipase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lipase