- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.56 Å
- Oligo State
- homo-dimer
- Ligands
- 14 x GOL: GLYCEROL(Non-functional Binders)
- 2 x ZN: ZINC ION(Non-covalent)
ZN.2: 4 residues within 4Å:- Chain A: C.317, C.319, C.322, H.348
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:C.317, A:C.319, A:C.322, A:H.348
ZN.11: 4 residues within 4Å:- Chain B: C.317, C.319, C.322, H.348
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:C.317, B:C.319, B:C.322, B:H.348
- 2 x QEI: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one(Non-covalent)
QEI.9: 9 residues within 4Å:- Chain A: S.102, F.105, D.155, I.200, Q.202, G.228, G.229, L.230, M.259
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:M.259
- Hydrogen bonds: A:S.102, A:Q.202, A:G.229
- Water bridges: A:S.102, A:G.104
- Salt bridges: A:D.155
- pi-Stacking: A:F.105
QEI.18: 9 residues within 4Å:- Chain B: S.102, F.105, D.155, I.200, Q.202, G.228, G.229, L.230, M.259
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:M.259
- Hydrogen bonds: B:S.102, B:Q.202, B:G.229
- Water bridges: B:S.102, B:G.104
- Salt bridges: B:D.155
- pi-Stacking: B:F.105
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Biela, I. et al., Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor. Plos One (2013)
- Release Date
- 2012-11-28
- Peptides
- Queuine tRNA-ribosyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.56 Å
- Oligo State
- homo-dimer
- Ligands
- 14 x GOL: GLYCEROL(Non-functional Binders)
- 2 x ZN: ZINC ION(Non-covalent)
- 2 x QEI: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Biela, I. et al., Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor. Plos One (2013)
- Release Date
- 2012-11-28
- Peptides
- Queuine tRNA-ribosyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A