SMTL ID : 4hvp.1

Structure of complex of synthetic HIV-1 protease with a substrate-based inhibitor at 2.3 Angstroms resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

1 x 2NC: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide(Non-covalent)

2NC.1: 24 residues within 4Å: Chain A: R.8, D.25, G.27, A.28, D.29, D.30, I.47, G.48, G.49, I.50, P.81, V.82 Chain B: R.8, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, P.81, V.82 25 PLIP interactions: 13 interactions with chain B, 12 interactions with chain A Hydrophobic interactions: B:V.32, B:P.81, B:V.82, A:A.28, A:I.47, A:I.50, A:P.81, A:V.82 Hydrogen bonds: B:G.27, B:G.27, B:D.29, B:D.29, B:D.30, B:G.48, B:G.48, A:R.8, A:G.27, A:D.29, A:D.29, A:G.48, A:G.48 Water bridges: B:G.48, B:R.87, A:I.50 Salt bridges: B:D.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miller, M. et al., Structure of complex of synthetic HIV-1 protease with a substrate-based inhibitor at 2.3 A resolution. Science (1989)

Release Date

1990-04-15

Peptides

HIV-1 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 PROTEASE

Related Entries With Identical Sequence