SMTL ID : 4hw2.2 (5 other biounits)

Discovery of potent Mcl-1 inhibitors using fragment-based methods and structure-based design

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x 19H: 6-chloro-3-[3-(4-chloro-3,5-dimethylphenoxy)propyl]-1H-indole-2-carboxylic acid(Non-covalent)

19H.1: 16 residues within 4Å: Chain A: A.57, F.58, M.61, L.65, L.76, V.79, M.80, V.83, F.84, R.93, T.96, L.97, F.100, G.101, I.124 Ligands: PGE.2 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.58, A:V.79, A:V.83, A:F.84, A:T.96, A:L.97, A:L.97, A:F.100, A:F.100, A:I.124 Salt bridges: A:R.93 pi-Stacking: A:F.100 Halogen bonds: A:A.57

2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.2: 4 residues within 4Å: Chain A: H.54, A.57, T.96 Ligands: 19H.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.96, A:T.96 PGE.3: 6 residues within 4Å: Chain A: V.50, N.53, H.54, N.90, G.92, F.148 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.53

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 4 residues within 4Å: Chain A: N.53, H.54, T.56, A.57 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.56, A:T.56, A:A.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Friberg, A. et al., Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design. J.Med.Chem. (2013)

Release Date

2013-01-09

Peptides

Induced myeloid leukemia cell differentiation protein Mcl-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Induced myeloid leukemia cell differentiation protein Mcl-1

Related Entries With Identical Sequence