SMTL ID : 4hw6.4 (3 other biounits)

Crystal structure of an auxiliary nutrient binding protein (BACOVA_00264) from Bacteroides ovatus ATCC 8483 at 1.70 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 3 residues within 4Å: Chain A: R.228, G.229, H.248 Ligand excluded by PLIP IOD.2: 5 residues within 4Å: Chain A: N.188, A.234, V.235, V.279, W.280 Ligand excluded by PLIP

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: N.192, P.257, A.258 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.257 Water bridges: A:L.191, A:A.258 EDO.4: 6 residues within 4Å: Chain A: H.281, T.283, D.285, W.286, E.352, D.353 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.283, A:D.285, A:R.299 Water bridges: A:D.353 EDO.5: 4 residues within 4Å: Chain A: T.178, T.179, N.180, R.221 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.178 Water bridges: A:T.178 EDO.6: 2 residues within 4Å: Chain A: K.60, I.72 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.60

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 2 residues within 4Å: Chain A: Y.313, I.314 Ligand excluded by PLIP CL.8: 5 residues within 4Å: Chain A: V.127, F.138, D.139, A.163, R.165 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a hypothetical protein (BACOVA_00264) from Bacteroides ovatus ATCC 8483 at 1.70 A resolution. To be published

Release Date

2012-12-12

Peptides

hypothetical protein, IPT/TIG domain protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

hypothetical protein, IPT/TIG domain protein

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