SMTL ID : 4hzh.2 (1 other biounit)

Structure of recombinant Gla-domainless prothrombin mutant S525A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

monomer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.327 No protein-ligand interaction detected (PLIP) NAG.2: 5 residues within 4Å: Chain A: R.46, E.52, N.54, T.56, T.57 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:T.56 Hydrogen bonds: A:R.46, A:T.56, A:T.56, A:T.57 NAG.3: 3 residues within 4Å: Chain A: H.30, N.32, E.39 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pozzi, N. et al., Crystal structure of prothrombin reveals conformational flexibility and mechanism of activation. J.Biol.Chem. (2013)

Release Date

2013-06-26

Peptides

Prothrombin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Prothrombin

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