- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.06 Å
- Oligo State
- homo-tetramer
- Ligands
- 20 x SO4: SULFATE ION(Non-functional Binders)
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.5: 4 residues within 4Å:- Chain A: G.95, I.96, T.97
- Ligands: NDP.6
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.95, A:T.97, A:T.97
- Water bridges: A:R.22
EDO.13: 7 residues within 4Å:- Chain B: G.86, V.87, D.88, V.128, G.131, M.132, K.135
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:V.87, B:D.88, B:M.132
EDO.19: 4 residues within 4Å:- Chain C: G.95, I.96, T.97
- Ligands: NDP.20
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:G.95, C:T.97, C:T.97
- Water bridges: C:R.22
EDO.27: 7 residues within 4Å:- Chain D: G.86, V.87, D.88, V.128, G.131, M.132, K.135
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:V.87, D:D.88, D:M.132
- 4 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
NDP.6: 27 residues within 4Å:- Chain A: G.19, A.20, S.21, R.22, G.23, I.24, A.43, T.44, L.65, N.66, V.67, N.93, A.94, G.95, I.96, T.116, V.143, G.144, S.145, Y.158, K.162, P.188, G.189, F.190, I.191, T.193
- Ligands: EDO.5
22 PLIP interactions:22 interactions with chain A- Hydrophobic interactions: A:P.188
- Hydrogen bonds: A:G.19, A:S.21, A:S.21, A:S.21, A:I.24, A:T.44, A:T.44, A:N.66, A:V.67, A:N.93, A:G.95, A:Y.158, A:K.162, A:I.191, A:T.193, A:T.193
- Water bridges: A:G.19, A:R.22, A:S.45
- Salt bridges: A:R.22, A:R.22
NDP.14: 27 residues within 4Å:- Chain B: G.19, A.20, S.21, R.22, G.23, I.24, A.43, T.44, L.65, N.66, V.67, N.93, A.94, G.95, I.96, T.116, V.143, G.144, S.145, Y.158, K.162, P.188, G.189, F.190, I.191, T.193, T.196
21 PLIP interactions:21 interactions with chain B- Hydrophobic interactions: B:P.188
- Hydrogen bonds: B:G.19, B:S.21, B:S.21, B:S.21, B:I.24, B:T.44, B:T.44, B:S.45, B:N.66, B:V.67, B:N.93, B:G.95, B:K.162, B:I.191, B:T.193, B:T.193, B:T.193, B:T.196
- Salt bridges: B:R.22, B:R.22
NDP.20: 27 residues within 4Å:- Chain C: G.19, A.20, S.21, R.22, G.23, I.24, A.43, T.44, L.65, N.66, V.67, N.93, A.94, G.95, I.96, T.116, V.143, G.144, S.145, Y.158, K.162, P.188, G.189, F.190, I.191, T.193
- Ligands: EDO.19
22 PLIP interactions:22 interactions with chain C- Hydrophobic interactions: C:P.188
- Hydrogen bonds: C:G.19, C:S.21, C:S.21, C:S.21, C:I.24, C:T.44, C:T.44, C:N.66, C:V.67, C:N.93, C:G.95, C:Y.158, C:K.162, C:I.191, C:T.193, C:T.193
- Water bridges: C:G.19, C:R.22, C:S.45
- Salt bridges: C:R.22, C:R.22
NDP.28: 27 residues within 4Å:- Chain D: G.19, A.20, S.21, R.22, G.23, I.24, A.43, T.44, L.65, N.66, V.67, N.93, A.94, G.95, I.96, T.116, V.143, G.144, S.145, Y.158, K.162, P.188, G.189, F.190, I.191, T.193, T.196
21 PLIP interactions:21 interactions with chain D- Hydrophobic interactions: D:P.188
- Hydrogen bonds: D:G.19, D:S.21, D:S.21, D:S.21, D:I.24, D:T.44, D:T.44, D:S.45, D:N.66, D:V.67, D:N.93, D:G.95, D:K.162, D:I.191, D:T.193, D:T.193, D:T.193, D:T.196
- Salt bridges: D:R.22, D:R.22
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hou, J. et al., Dissecting the Structural Elements for the Activation of beta-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae. J.Bacteriol. (2015)
- Release Date
- 2012-12-12
- Peptides
- 3-oxoacyl-[acyl-carrier-protein] reductase FabG: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.06 Å
- Oligo State
- homo-tetramer
- Ligands
- 20 x SO4: SULFATE ION(Non-functional Binders)
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 4 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hou, J. et al., Dissecting the Structural Elements for the Activation of beta-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae. J.Bacteriol. (2015)
- Release Date
- 2012-12-12
- Peptides
- 3-oxoacyl-[acyl-carrier-protein] reductase FabG: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B