SMTL ID : 4i0n.1

Pore forming protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

5 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.3: 1 residues within 4Å: Chain A: D.209 No protein-ligand interaction detected (PLIP) MG.4: 1 residues within 4Å: Chain A: D.30 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.30, H2O.3, H2O.4, H2O.8, H2O.8 MG.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 4 residues within 4Å: Chain A: K.74, L.198, N.200, W.254 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.198, A:N.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, X.X. et al., Structural and functional analysis of the pore-forming toxin NetB from Clostridium perfringens. MBio (2013)

Release Date

2013-03-20

Peptides

Necrotic enteritis toxin B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Necrotic enteritis toxin B