SMTL ID : 4i1n.1

R104A-ca1697 nanobody binding to the binary DHFR.folate complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

hetero-1-1-mer

Ligands

1 x FOL: FOLIC ACID(Non-covalent)

FOL.1: 14 residues within 4Å: Chain A: I.5, A.6, A.7, D.27, L.28, A.29, W.30, F.31, K.32, L.54, R.57, I.94, Y.100, T.113 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:A.6, A:T.113, A:T.113 Water bridges: A:A.6, A:D.27, A:D.27, A:A.29, A:A.29, A:S.49, A:S.49, A:Y.100 Salt bridges: A:D.27, A:R.57 pi-Stacking: A:F.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oyen, D. et al., Exploring an alternative antibody interaction mechanism. To be Published

Release Date

2013-11-27

Peptides

Dihydrofolate reductase: A
Protein ca1697 (nanobody): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Dihydrofolate reductase

Protein ca1697 (nanobody)

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