SMTL ID : 4i3e.1

Crystal structure of Staphylococcal IMPase - I complexed with products.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

6 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: K.42, D.47, L.48, E.76 Ligands: PO4.2 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.76, H2O.1, H2O.1, H2O.1 MG.4: 6 residues within 4Å: Chain A: D.94, D.97, D.215 Ligands: PO4.2, GOL.3, MG.5 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.94, A:D.97, A:D.215, H2O.1 MG.5: 7 residues within 4Å: Chain A: E.76, D.94, I.96, D.97, T.99 Ligands: PO4.2, MG.4 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.76, A:D.94, A:I.96, H2O.1 MG.7: 3 residues within 4Å: Chain B: E.76 Ligands: PO4.6, MG.10 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.76, H2O.3, H2O.3 MG.9: 6 residues within 4Å: Chain B: D.94, D.97, D.215 Ligands: PO4.6, GOL.8, MG.10 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.94, B:D.97, B:D.215 MG.10: 8 residues within 4Å: Chain B: E.76, D.94, I.96, D.97, T.99 Ligands: PO4.6, MG.7, MG.9 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.76, B:D.94, B:I.96, H2O.2

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 11 residues within 4Å: Chain A: E.76, D.94, I.96, D.97, G.98, T.99, D.215 Ligands: MG.1, GOL.3, MG.4, MG.5 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.98, A:T.99, A:T.99, A:T.99 Water bridges: A:E.77 PO4.6: 11 residues within 4Å: Chain B: E.76, D.94, I.96, D.97, G.98, T.99, D.215 Ligands: MG.7, GOL.8, MG.9, MG.10 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.98, B:T.99 Water bridges: B:E.77

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: D.97, G.189, A.190, C.191, D.215 Ligands: PO4.2, MG.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.189, A:C.191 Water bridges: A:N.208 GOL.8: 7 residues within 4Å: Chain B: D.97, G.189, A.190, C.191, D.215 Ligands: PO4.6, MG.9 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:C.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bhattacharyya, S. et al., Crystal structure of Staphylococcal IMPase - I complexed with products. To be Published

Release Date

2013-12-18

Peptides

Inositol monophosphatase family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Inositol monophosphatase family protein

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