SMTL ID : 4i8a.2 (1 other biounit)

Alanine-glyoxylate aminotransferase variant S187F

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

9 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: H.135, T.137 No protein-ligand interaction detected (PLIP) GOL.2: 3 residues within 4Å: Chain A: H.126, P.127, H.148 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.126 GOL.3: 6 residues within 4Å: Chain A: K.211, M.350, L.353, R.362 Chain B: M.51, Y.262 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.362 GOL.4: 4 residues within 4Å: Chain A: Q.284, G.285, E.287, N.288 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.285, A:E.287, A:N.288, A:N.288 GOL.5: 2 residues within 4Å: Chain B: R.124, H.126 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:H.126 GOL.6: 2 residues within 4Å: Chain B: P.75 Ligands: GOL.8 No protein-ligand interaction detected (PLIP) GOL.7: 2 residues within 4Å: Chain B: D.257 Ligands: GOL.8 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.257 GOL.8: 4 residues within 4Å: Chain B: K.229, C.255 Ligands: GOL.6, GOL.7 No protein-ligand interaction detected (PLIP) GOL.9: 1 residues within 4Å: Chain B: E.140 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oppici, E. et al., Crystal structure of the S187F variant of human liver alanine: Aminotransferase associated with primary hyperoxaluria type I and its functional implications. Proteins (2013)

Release Date

2013-05-01

Peptides

Serine-pyruvate aminotransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Serine-pyruvate aminotransferase

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