SMTL ID : 4i9o.2 (1 other biounit)

Crystal Structure of GACKIX L664C Tethered to 1-10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x KI1: 1-{4-[4-chloro-3-(trifluoromethyl)phenyl]-4-hydroxypiperidin-1-yl}-3-sulfanylpropan-1-one(Non-covalent)

KI1.1: 10 residues within 4Å: Chain A: L.36, I.40, L.57, Y.60, A.61, V.64, I.89, E.92, C.93 Ligands: EDO.2 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.60, A:I.89 Halogen bonds: A:L.57 KI1.4: 10 residues within 4Å: Chain B: L.36, I.40, L.57, Y.60, A.61, V.64, I.89, E.92, C.93 Ligands: EDO.5 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:Y.60, B:I.89 Halogen bonds: B:L.57

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: I.40, F.41 Ligands: KI1.1 No protein-ligand interaction detected (PLIP) EDO.3: 4 residues within 4Å: Chain A: W.20, H.23, S.74, R.75 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.23, A:R.75 Water bridges: A:S.74, A:D.76 EDO.5: 3 residues within 4Å: Chain B: I.40, F.41 Ligands: KI1.4 No protein-ligand interaction detected (PLIP) EDO.6: 4 residues within 4Å: Chain B: W.20, H.23, S.74, R.75 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:H.23, B:R.75 Water bridges: B:S.74, B:D.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, N. et al., Ordering a dynamic protein via a small-molecule stabilizer. J.Am.Chem.Soc. (2013)

Release Date

2013-03-06

Peptides

CREB-binding protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

CREB-binding protein

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