SMTL ID : 4ian.1

Crystal Structure of apo Human PRPF4B kinase domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.338, N.340, Q.341 Chain B: S.338 Ligands: SO4.5 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.338, A:Q.341, A:Q.341 Water bridges: A:I.339 SO4.2: 3 residues within 4Å: Chain A: K.92, F.93, R.153 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Salt bridges: A:K.92, A:R.153, B:K.256 SO4.3: 4 residues within 4Å: Chain A: Y.194, R.198, R.201, N.239 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.198, A:R.198 Salt bridges: A:R.198, A:R.201 SO4.4: 1 residues within 4Å: Chain A: R.100 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.100 SO4.5: 8 residues within 4Å: Chain A: R.336, I.337, S.338, Q.341 Chain B: S.338, N.340, Q.341 Ligands: SO4.1 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:S.338, B:S.338, B:Q.341, B:Q.341, A:S.338 SO4.6: 3 residues within 4Å: Chain B: Y.194, R.198, R.201 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.198, B:R.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gao, Q. et al., Evaluation of Cancer Dependence and Druggability of PRP4 Kinase Using Cellular, Biochemical, and Structural Approaches. J.Biol.Chem. (2013)

Release Date

2013-08-28

Peptides

Serine/threonine-protein kinase PRP4 homolog: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase PRP4 homolog

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