SMTL ID : 4ib2.1 (1 other biounit)

Crystal structure of a putative lipoprotein (RUMGNA_00858) from Ruminococcus gnavus ATCC 29149 at 1.76 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

monomer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: D.47, Y.48, E.162, A.163, A.164, Y.182 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: S.102, L.103, L.195 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: V.156, E.157, I.158 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: K.111, A.174 Ligand excluded by PLIP

1 x MET: METHIONINE(Non-covalent)

MET.5: 12 residues within 4Å: Chain A: H.22, Y.48, F.65, Q.66, H.67, Y.70, E.91, N.120, R.123, N.179, N.181, N.210 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:E.91, A:E.91, A:N.179, A:N.210 Water bridges: A:R.123, A:R.123, A:G.180, A:G.180 Salt bridges: A:H.67, A:R.123

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 6 residues within 4Å: Chain A: D.9, K.14, G.58, E.59, F.60, D.61 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.14 Water bridges: A:D.9, A:F.60, A:D.61 GOL.7: 6 residues within 4Å: Chain A: L.103, D.104, I.106, N.131, G.132, Y.154 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.104, A:G.132 Water bridges: A:N.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a putative lipoprotein (RUMGNA_00858) from Ruminococcus gnavus ATCC 29149 at 1.76 A resolution. To be published

Release Date

2013-01-16

Peptides

Putative Lipoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative Lipoprotein

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